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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815282.1_cds_XP_016498259.1_12309
CDS Infomation

[gene=LOC107817007] [db_xref=GeneID:107817007] [protein=polygalacturonase-like] [protein_id=XP_016498259.1] [location=join(83874..84311,84731..85020,85181..85409,85630..85848)] [gbkey=CDS]
Sequence

ATGAATACCAGAAAATTTATTGCCCTTATTCTTCTAACCGTCTTCTTTCATTCATCATCA
GGAAGCAAGACTAGTTACAATGTGCAAAGTTATGGAGCGAAACCTGATGGCAAGACTGAT
TCAACAAAAGCATTTCTGAGTGCATGGGCTGCAGCTTGTGCTTCCACAAAGTCTGTTGTG
ATATATGTGCCACAAGGAAGGTATTTAATAGGAAGTGCTGCGTTTTGGGGACAATATTGC
AAGAATAAAGCTACTACTATCAGGATTGATGGCACCTTAGTGGCACCCTCTGATTATAAA
ATTATAGGTAATAATGGAAATTGGCTAAAGTTTGAGAGAGTCAACGGAGTCACCATTTCT
GGTGGGACTTTTGATGGCCAAGGTGCTTCTCTTTGGGCTTGTAAAGCCTCTGGCAAGAGT
TGTCCTGCCGGAGCAACGACACTTGCCTTTTACAATTCAAACAACATTGTGATAAGTGGA
TTGACTTCATTAAACAGCCAGATGTTCCATGTGGTACTTGATGGGTGCCAAAATGCTAAG
CTGCAGAAGATGAAAATCTCAGCCTCAGCTAGCAGCCCAAACACTGATGGGATTCACATA
GAAGCTTCCTCGGGTGTCACTATTCTGAAAACTGTAATTGGTACTGGAGATGACTGTGTT
TCAATAGGCCCTGGCACCTCCAACTTGTGGATTGAAAATGTCTCCTGTGGCCCTGGCCAC
GGCATAAGCATTGGAAGTCTAGGATGGGGTATGCAAGAACCAGGAGTTCAAAATGTCACA
GTGAAGACCACTACATTTAGAGGTACACAAAATGGTCTGAGAATAAAGACATGGGCAAGG
CCTAGCAATGGATTTGTAAAAGGTGTTCTCTTTCAGCATTCTGTGATGGTGAATGCCAGA
TACCCCATCTTAATTGACCAAGAATATTGCCCTGATCAGAAGAATTGCCCTGGCCAGGAA
TCAGGAGTTAAGATAAGCGATGTAACATATCAAGACGTTCATGGAACATCAACATCACAA
GTCGCAGTAAAACTTGCTTGTAGTAAGGCTAATCCCTGCAAAGGGATTACACTGGAGGAT
GTAAATCTTACCTTTAAAAATCAACAACCACAAGCATTATGCTCCAATGCTGCTGGAACT
TCCTATGGTGTAAATAAACCAGCAAGCTGTTTGTAG

Peptide Sequence

PEP ID

XP_016498259.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MNTRKFIALILLTVFFHSSSGSKTSYNVQSYGAKPDGKTDSTKAFLSAWAAACASTKSVV
IYVPQGRYLIGSAAFWGQYCKNKATTIRIDGTLVAPSDYKIIGNNGNWLKFERVNGVTIS
GGTFDGQGASLWACKASGKSCPAGATTLAFYNSNNIVISGLTSLNSQMFHVVLDGCQNAK
LQKMKISASASSPNTDGIHIEASSGVTILKTVIGTGDDCVSIGPGTSNLWIENVSCGPGH
GISIGSLGWGMQEPGVQNVTVKTTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSVMVNAR
YPILIDQEYCPDQKNCPGQESGVKISDVTYQDVHGTSTSQVAVKLACSKANPCKGITLED
VNLTFKNQQPQALCSNAAGTSYGVNKPASCL

Transcript Sequence

Gene sequence data has not been registered.